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arXiv preprints from January 1, 2026 through September 10, 2026 — 00:56:02 EST

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Posted in cs.LG · 2026-08-17 · Siqi Li, Zhi Li, Tong Liu, Shuai Zhang, Yanfei Jia, Zhiqiang Yi, Jue Xie, Ni Ji

Multi-Feature Riemannian Hypergraph for Online Test-Time Adaptation of Motor Imagery Brain-Computer Interface

In clinical motor imagery brain-computer interface (MI-BCI) decoding, cross-day transferability and online operation remain two critical challenges. Hypergraphs can improve transferability by capturing higher-order sample relationships, yet existing hypergraph-based methods for online emotion recognition neglect the cross-day benefits...

💬 0 commentsarXiv:2608.16134v1PDF
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Posted in q-bio.OT · 2026-08-17 · Andreas Prlić, Cameron Mura

Phil Bourne (1953-2026): From Small Molecules to Big Data --- The Journey of a Multifaceted Visionary

Born in London in 1953 and raised in Australia, Phil Bourne spent over four decades in science moving across scales: from crystal structures to the world's premier structural biology database; from scientific journals to national data policy; from molecules to institutions. The International Society for Computational Biology (ISCB)...

💬 0 commentsarXiv:2608.15978v1PDF
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Posted in q-bio.NC · 2026-08-16 · Ryota Kanai

A Control-Theoretic Formulation of Global Workspace Theory

Global workspace theory explains conscious access as the broadcasting of selected information to the rest of the network, but it lacks a formal criterion for identifying the mechanism that enables this access. We propose that a global workspace is a mediator, namely, a subnetwork that receives activity from distributed systems,...

💬 0 commentsarXiv:2608.15926v1PDF
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Posted in q-bio.QM · 2026-08-16 · Ching-En Chiu, Yoo Ri Kim, Magdi Saba, Danilo Mandic, Marta Varela

Characterising cardiac tissue properties with graph neural networks

Characterising electrophysiological properties of cardiac tissue efficiently and accurately from spatially sparse intracardiac measurements is clinically important for localising ablation targets and improving arrhythmia treatment. We developed a graph neural network-based framework trained on synthetic electrogram signals on 2D flat...

💬 0 commentsarXiv:2608.15843v1PDF
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Posted in cs.LG · 2026-08-16 · Li Tang, Michael D Abramoff

Population Structure Analysis of an Inbred Population using Quantitative Shape Phenotyping from Stereo Retinal Photographs

The population structure of an inbred population of 781 people on Norfolk Island in the Pacific, 318 of which are descendants of the original Mutineers of the Bounty, is analyzed phenotypically using shape from stereo retinal fundus photographs. Three-dimensional optic nerve head (ONH) shape is reconstructed from stereo pairs by a...

💬 0 commentsarXiv:2608.15471v1PDF
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Posted in q-bio.NC · 2026-08-15 · Julio N. Machado, Joana M. G. L. Silva, Katiele V. Brito, Rodrigo Pena, Fernanda Selingardi Matias

The effect of the excitatory feedback in anticipated synchronization and phase bistability regimes in neuronal populations

Anticipated synchronization (AS), in which the receiver leads the sender and the phase lag is negative, can emerge in unidirectionally coupled dynamical systems when the receiver has faster internal dynamics than the sender. In cortical-like population models, AS and bistability between AS and delayed synchronization (DS) have been...

💬 0 commentsarXiv:2608.15449v1PDF
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Posted in q-bio.TO · 2026-08-15 · Raisa Akhtaruzzaman, Mohammad Ibrahim Hossain, Rahid Zaman, Ashfaq Adnan

Head Impact Characterization and Cellular Response of a Live-neuron cell-integrated Biomechanical Full-body Surrogate Model

In this study, we develop a novel integrated framework that links the impact response with cellular dynamics using a live-neuron cell-integrated biomechanical full-body surrogate model. The impact event is simulated by allowing the surrogate model to fall from controlled seated release angles of 30-degree, 60-degree, and 90-degree....

💬 0 commentsarXiv:2608.15418v1PDF
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Posted in q-bio.PE · 2026-08-15 · Jose de Jesus Bernal-Alvarado, David Delepine, Georges Delepine

Stochastic Pharmacokinetic Escape: A Field-Theoretic Approach to Fluctuation-Induced Tumor Relapse

Classical mathematical oncology employs deterministic mean-field models predicting that sufficiently high chemotherapy doses drive tumor density to zero. We show that this apparent cure is an artifact of neglecting demographic fluctuations. We construct a nonequilibrium stochastic PK-PD field theory combining a two-compartment...

💬 0 commentsarXiv:2608.15356v1PDF
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Posted in cond-mat.soft · 2026-08-15 · Valentin Slepukhin, Oskar Hallatschek

Growth-Induced Transitions in Viscoelastic Matter

Growth is a fundamental process in living systems. Although the stress-deformation response of growing materials is often described as either purely elastic or purely viscous, many biological tissues, from biofilms to tumors, exhibit both elastic and viscous behavior. Here, we show that this viscoelastic response can crucially control...

💬 0 commentsarXiv:2608.15320v1PDF
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Posted in q-bio.PE · 2026-08-15 · Kristina Wicke, Arne Mooers

Phylogeny-based metrics of biodiversity: concepts and methods

The concept of valuing evolutionary history has a long tradition and was formalized by several research groups in the early 1990s, each aiming to capture the products of evolution more comprehensively than species richness alone. Preserving the "Tree of Life" has since become a central, if sometimes contested, goal in conservation...

💬 0 commentsarXiv:2608.15278v1PDF
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Posted in q-bio.NC · 2026-08-15 · Yuyang Zheng, Nan Li, Wenxia Deng, Lige Yan, Xiang Li, Si Chen

Valhalla: A Layered Knowledge-State and Service-Governance Framework for Long-Term Scientific Knowledge Work

As large language model (LLM) agents are increasingly adopted in scientific research, external knowledge bases, knowledge graphs, and long-term memory have improved information retrieval and task continuity. However, most structured knowledge systems remain node-centric, representing files, concepts, results, and judgments as nodes...

💬 0 commentsarXiv:2608.15193v1PDF
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Posted in q-bio.NC · 2026-08-15 · Ehsan Ahmadi, Mojtaba Madadi Asl, Alireza Valizadeh

Phase- and amplitude-dependent control of synchronization in excitatory-inhibitory networks via pulsed stimulation

Oscillatory neuronal networks exhibit complex collective responses to external perturbations that depend on both the intrinsic network dynamics and the timing of stimulation. Although phase response curves (PRCs) have become a standard tool for characterizing these responses, phase resetting alone provides an incomplete description of...

💬 0 commentsarXiv:2608.15081v1PDF
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Posted in q-bio.NC · 2026-08-15 · Parsa Shahab Rad, Mojtaba Madadi Asl, Alireza Valizadeh

Synaptic delays modulate population phase and amplitude responses in oscillatory excitatory-inhibitory networks

Synaptic delays are fundamental determinants of neuronal communication and can profoundly influence the emergence and stability of cortical oscillations. Although their role in shaping network synchronization is well established, how synaptic delays regulate the collective response of neuronal populations to transient perturbations...

💬 0 commentsarXiv:2608.15077v1PDF
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Posted in eess.SP · 2026-08-15 · Jacob Trueb, Amey Kasbe, Aniruddh Srinivasan

CORAL: A Modality Invariant Framework for Robust Vital Sign Rate Estimation Using Correloform Analysis

Heart rate and respiration rate are crucial vital signs. We present CORAL to address challenges in automating continuous vital sign monitoring 1) in-hospital across broader populations (age, disease states), 2) at-home in telehealth and wellbeing applications (noise, placement), and 3) across data modalities (ECG, PPG, SCG, BioZ,...

💬 0 commentsarXiv:2608.14973v1PDF
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Posted in q-bio.PE · 2026-08-15 · Zachary P Kilpatrick

Social Discounting Enables Fast and Reliable Collective Escape

Solitary animals face a tradeoff when detecting threats: faster detection means accepting more false alarms. We show that groups can manage this tradeoff better by treating an undisturbed neighbor as evidence against a threat, becoming both faster and more accurate than lone individuals. Modeling each animal as a noisy...

💬 0 commentsarXiv:2608.14965v1PDF
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Posted in cs.LG · 2026-08-15 · Ying-Qiu Zheng, Alex Fung, Stephen M Smith, Rogier B Mars, Saad Jbabdi

PathFinder: Joint Decompositions of Linked Multimodal Datasets

Low-rank matrix decompositions can uncover patterns and structure in data and have a number of different applications across many disciplines. Extensions to "joint" low-rank decompositions have been proposed to link datasets from different modalities. While these methods enable the discovery of common patterns across modalities, they...

💬 0 commentsarXiv:2608.14951v1PDF
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Posted in q-bio.QM · 2026-08-14 · Yashrajsinh Jadeja, Haining Lin, Mihir Metkar

MultiStructRNA: a Python package for multi-algorithm RNA secondary structure prediction, ensemble analysis, and visualization

We introduce MultiStructRNA, a unified Python toolkit for RNA secondary structure prediction, ensemble analysis, and visualization. Although RNA secondary structure is central to RNA biology and therapeutic design, practical adoption is often hindered by fragmented tooling, incompatible input and output formats, and limited...

💬 0 commentsarXiv:2608.14846v1PDF
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Posted in eess.AS · 2026-08-14 · Christiaan M. Geldenhuys, Thomas R. Niesler

A Parameter-Free Few-Shot Evaluation for Elephant Vocalisation Classification

We present a parameter-free episodic evaluation of nearest-centroid classification for elephant vocalisations on fixed pretrained acoustic embeddings, across the Elephant Voices (EV) and Linguistic Data Consortium (LDC) datasets. Rather than asking which embedding yields the best classifier when trained on all available labelled data,...

💬 0 commentsarXiv:2608.14824v1PDF
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Posted in physics.flu-dyn · 2026-08-17 · Abhijeet Minz, Lois E. Baker, Jacques Vanneste

Volume-preserving Lagrangian averaging using polar factorization

The generalised Lagrangian mean (GLM) theory of Andrews & McIntyre provides a powerful framework to study the interactions between waves and flows. A drawback of this theory is that the Lagrangian mean velocity is divergent even for incompressible fluids because the mean flow map, which sends the Lagrangian labels of fluid parcels to...

💬 0 commentsarXiv:2608.16862v1PDF
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Posted in cond-mat.dis-nn · 2026-08-17 · Joaquim Telles de Miranda, Tobias Micklitz

Spectral Edge Rigidity of Quantum Chaotic States

We determine the distribution of fidelity susceptibility for chaotic eigenstates at the spectral edge of Gaussian random-matrix ensembles. Previous work showed that, in the unitary class, the characteristic susceptibility scale of edge states grows as $D^{1/3}$, rather than proportionally to $D$ as in the spectral bulk, reflecting...

💬 0 commentsarXiv:2608.16847v1PDF
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Posted in astro-ph.HE · 2026-08-17 · Swarnendu Jana, Aditya S. Mondal, Aru Beri, Gulab C. Dewangan

The first comprehensive spectral and timing study of the ultra-compact X-ray binary 4U 1812-12 with NICER and NuSTAR

The source 4U 1812-12 is a persistent, weakly variable low-mass X-ray binary containing a neutron star. The source was observed by NICER between 2019 and 2021 and, more recently, by NuSTAR in 2025. During the NICER and NuSTAR observations, the source was detected in a hard spectral state with a bolometric luminosity of $\sim...

💬 0 commentsarXiv:2608.16841v1PDF
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Posted in quant-ph · 2026-08-17 · Abbas Taherpour, Amirhossein Taherpour, Tamer Khattab

Global Minimax Readout of a Qubit Direction

We determine the exact worst-direction Fisher-information cost of using a parameter-independent readout to estimate an unknown qubit direction at known Bloch-vector length $η$. Every fixed-local architecture, including recorded classical randomization, heterogeneous single-copy measurements, and arbitrary outcome spaces, reduces...

💬 0 commentsarXiv:2608.16840v1PDF
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Posted in quant-ph · 2026-08-17 · K. Beloy

Classical-limit formula for matrix elements between bound states of distinct one-dimensional potentials

A classical-limit formula is derived for matrix elements between bound states of distinct one-dimensional potentials. We leave open the physical interpretation of the potentials, but generally envision them to be Born-Oppenheimer-type potentials with the position variable $x$ identifying with a slowly evolving degree of freedom of the...

💬 0 commentsarXiv:2608.16835v1PDF
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Posted in nucl-th · 2026-08-17 · Lucas Chouinard, Sofia Karampagia

Implementation of the Moments Method in TALYS: Sensitivity of $^{56,57}$Fe$(n,γ)$ observables to shell model nuclear level densities

The Moments Method (MM), a statistical spectroscopy framework built upon configuration interaction shell model Hamiltonians that enables shell model descriptions of nuclear level densities without requiring full diagonalization of the many body Hamiltonian, is implemented in the TALYS reaction code to investigate the sensitivity of...

💬 0 commentsarXiv:2608.16830v1PDF
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Posted in cond-mat.mes-hall · 2026-08-17 · Thiago G. L. Brito, Daniel Arribas, Sofia Canola, Klaus Kuhnke, Tomáš Neuman, Anna Rosławska

Tuning single-molecule fluorescence by atomic-scale control of the local environment

Molecules that absorb and emit light play a central role in microscopy, light-emitting devices and photosynthesis. Their fluorescence arises from well-defined radiative transitions that are governed by the electronic states and their coupling to the nuclear motion that are influenced by the local environment. Yet the effect of...

💬 0 commentsarXiv:2608.16826v1PDF