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arXiv preprints from January 1, 2026 through September 22, 2026 — 00:36:14 EST

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Posted in physics.bio-ph · 2026-01-16 · Han Zhou, Tao Zhou, Shiwei Yan

Unraveling the Allosteric Mechanism and Mechanical Stability of Partial and Complete Loss-of-Function Mutations in p53 DNA-Binding Domain

TP53 is the most frequently mutated tumor suppressor gene in human cancers, with mutations primarily in its DNA-binding domain (p53-DBD). Mutations in p53-DBD are categorized into hotspot mutations (resulting in complete loss-of-function) and non-hotspot mutations (inducing partial loss-of-function). However, the allosteric mechanisms...

💬 0 commentsarXiv:2601.11069v1PDF
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Posted in astro-ph.CO · 2026-01-16 · Weiyang Liu, Xin Wang, Hu Zhan, Karl Glazebrook, Mengtao Tang, Michele Trenti

A Portrait of the Cosmic Reionisation History in the Context of the Early Dark Energy Model

Recent JWST observations of Lyman-$α$ emission at $z \sim 11-6$ indicate a rapid reionization of the intergalactic medium within the first $\sim700$ Myr. The required Lyman continuum (LyC) photon budget may naturally arise from the unexpectedly high galaxy number densities revealed by JWST, reducing the need for scenarios invoking...

💬 0 commentsarXiv:2601.11068v1PDF
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Posted in cs.CV · 2026-01-16 · Richard Hartley

Conformal Point and the Calibrated Conic

This gives some information about the conformal point and the calibrating conic, and their relationship one to the other. These concepts are useful for visualizing image geometry, and lead to intuitive ways to compute geometry, such as angles and directions in an image.

💬 0 commentsarXiv:2601.11679v1PDF
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Posted in math.CO · 2026-01-16 · Primož Šparl

Cubic factor-invariant graphs of bialternating cycle quotient type

In 2019, investigation of the so-called factor-invariant cubic graphs was initiated by Alspach, Khodadadpour and Kreher. For a cubic graph $Γ$ and a vertex-transitive subgroup $G$ of $\mathrm{Aut}(Γ)$, a $2$-factor $\mathcal{C}$ of $Γ$ is said to be {\em $G$-invariant} if the set $\mathcal{C}$ is preserved by each element of $G$....

💬 0 commentsarXiv:2601.11067v1PDF
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Posted in stat.CO · 2026-01-16 · Sebastiano Grazzi, Sifan Liu, Gareth O. Roberts, Jun Yang

Sub-Cauchy Sampling: Escaping the Dark Side of the Moon

We introduce a Markov chain Monte Carlo algorithm based on Sub-Cauchy Projection, a geometric transformation that generalizes stereographic projection by mapping Euclidean space into a spherical cap of a hyper-sphere, referred to as the complement of the dark side of the moon. We prove that our proposed method is uniformly ergodic for...

💬 0 commentsarXiv:2601.11066v1PDF
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Posted in cs.CY · 2026-01-16 · Rachmadita Andreswari, Stephan A. Fahrenkrog-Petersen, Jan Mendling

Fairness in Healthcare Processes: A Quantitative Analysis of Decision Making in Triage

Fairness in automated decision-making has become a critical concern, particularly in high-pressure healthcare scenarios such as emergency triage, where fast and equitable decisions are essential. Process mining is increasingly investigating fairness. There is a growing area focusing on fairness-aware algorithms. So far, we know less...

💬 0 commentsarXiv:2601.11065v3PDF
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Posted in hep-ph · 2026-01-16 · Xiang-Wei Shi, Sheng-Qin Feng

Spectral Signatures of Heavy Quarkonia in a Rotating and Anisotropic Quark-Gluon Plasma: A Holographic Study

We investigate the in-medium spectral functions and effective masses of heavy quarkonia charmonium ($J/Ψ$) and bottomonium ($Υ(1S)$) in a quark-gluon plasma (QGP) possessing both global rotation and spatial anisotropy. Using a gauge/gravity holographic model incorporating finite temperature, chemical potential, and warp factor, we...

💬 0 commentsarXiv:2601.11064v1PDF
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Posted in cs.RO · 2026-01-16 · Haishan Zeng, Mengna Wang, Peng Li

EmboTeam: Grounding LLM Reasoning into Reactive Behavior Trees via PDDL for Embodied Multi-Robot Collaboration

In embodied artificial intelligence, enabling heterogeneous robot teams to execute long-horizon tasks from high-level instructions remains a critical challenge. While large language models (LLMs) show promise in instruction parsing and preliminary planning, they exhibit limitations in long-term reasoning and dynamic multi-robot...

💬 0 commentsarXiv:2601.11063v2PDF
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Posted in cond-mat.quant-gas · 2026-01-16 · Chao Zhang

Mobile impurity coupled to correlated lattice bosons

We investigate how the coherence and spatial dressing of a single impurity evolve in the two-dimensional Bose-Hubbard model when the impurity couples attractively to the bath. Using large-scale, sign-problem-free worm-algorithm quantum Monte Carlo, we measure the impurity winding, bath superfluid response and compressibility, and...

💬 0 commentsarXiv:2601.11062v2PDF
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Posted in physics.soc-ph · 2026-01-16 · Sean Elliott, Sohini Roy

Critical Transit Infrastructure in Smart Cities and Urban Air Quality: A Multi-City Seasonal Comparison of Ridership and PM2.5

Public transit is a critical component of urban mobility and equity, yet mobility and air-quality linkages are rarely operationalized in reproducible smart-city analytics workflows. This study develops a transparent, multi-source monitoring dataset that integrates agency-reported transit ridership with ambient fine particulate matter...

💬 0 commentsarXiv:2601.19937v2PDF
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Posted in cs.LG · 2026-01-16 · Lecheng Yan, Ruizhe Li, Guanhua Chen, Qing Li, Jiahui Geng, Wenxi Li, Longyue Wang, Chenyang Lyu

Spurious Rewards Paradox: Mechanistically Understanding How RLVR Activates Memorization Shortcuts in LLMs

Reinforcement Learning with Verifiable Rewards (RLVR) is highly effective for enhancing LLM reasoning, yet recent evidence shows models like Qwen 2.5 achieve significant gains even with spurious or incorrect rewards. We investigate this phenomenon and identify a "Perplexity Paradox": spurious RLVR triggers a divergence where...

💬 0 commentsarXiv:2601.11061v2PDF
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Posted in cs.HC · 2026-01-16 · Emelie Fälton, Isabelle Strömstedt, Mathis Brossier, Andreas Göransson, Konrad Schönborn, Amy Loutfi, Erik Sunden, Mujtaba Fadhil Jawad, Yadgar Suleiman, Johanna Björklund, Mario Romero, Anders Ynnerman, Lonni Besançon

Children's Expectations, Engagement, and Evaluation of an LLM-enabled Spherical Visualization Platform in the Classroom

We present our first stage results from deploying an LLM-augmented visualization software in a classroom setting to engage primary school children with earth-related datasets. Motivated by the growing interest in conversational AI as a means to support inquiry-based learning, we investigate children's expectations, engagement, and...

💬 0 commentsarXiv:2601.11060v1PDF
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Posted in cs.CR · 2026-01-16 · Shuai Zhang, Minzhao Lyu, Hassan Habibi Gharakheili

A Survey on Mapping Digital Systems with Bill of Materials: Development, Practices, and Challenges

Modern digital ecosystems, spanning software, hardware, learning models, datasets, and cryptographic products, continue to grow in complexity, making it difficult for organizations to understand and manage component dependencies. Bills of Materials (BOMs) have emerged as a structured way to document product components, their...

💬 0 commentsarXiv:2601.11678v1PDF
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Posted in math.RA · 2026-01-16 · Projesh Nath Choudhury, Shaun Fallat, Chi-Kwong Li

Semigroup automorphisms of total positivity

Totally positive (TP) and totally nonnegative (TN) matrices connect to analysis, mechanics, and to dual canonical bases in reductive groups, by well-known works of Schoenberg, Gantmacher-Krein, Lusztig, and others. TP matrices form a multiplicatively closed semigroup, contained in the larger monoid of invertible totally nonnegative...

💬 0 commentsarXiv:2601.11059v1PDF
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Posted in cond-mat.quant-gas · 2026-01-16 · Chao Zhang

Impurity Self-Trapping in Lattice Bose systems

We map out the global phase diagram of a single mobile impurity in the two-dimensional Bose-Hubbard model, spanning the bath evolution from a compressible superfluid (SF) to an incompressible Mott insulator (MI) and the full range of impurity-bath coupling. Using sign-problem-free worm-algorithm quantum Monte Carlo, we identify two...

💬 0 commentsarXiv:2601.11058v3PDF
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Posted in cs.AR · 2026-01-16 · Hongshi Tan, Yao Chen, Xinyu Chen, Qizhen Zhang, Cheng Chen, Weng-Fai Wong, Bingsheng He

RidgeWalker: Perfectly Pipelined Graph Random Walks on FPGAs

Graph Random Walks (GRWs) offer efficient approximations of key graph properties and have been widely adopted in many applications. However, GRW workloads are notoriously difficult to accelerate due to their strong data dependencies, irregular memory access patterns, and imbalanced execution behavior. While recent work explores...

💬 0 commentsarXiv:2601.11057v1PDF
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Posted in math.FA · 2026-01-16 · Enrique García-Sánchez, Denny H. Leung, Mitchell A. Taylor, Pedro Tradacete

Banach lattices with upper $p$-estimates: Renorming and factorization

The notions of $p$-convexity and concavity are fundamental tools for studying Banach lattices, as they partition the class of Banach lattices into a scale of spaces with $L_p$-like properties. Upper and lower $p$-estimates provide a refinement of this scale, modeled by the Lorentz spaces $L_{p,\infty}$ and $L_{p,1}$, respectively. In...

💬 0 commentsarXiv:2601.11056v1PDF
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Posted in cond-mat.str-el · 2026-01-16 · Lennart Klebl, Dante M. Kennes

Surface Functional Renormalization Group for Layered Quantum Materials

We present an extension to the two-dimensional functional renormalization group to efficiently treat interactions on the surface or at interfaces of three-dimensional systems. As an application, we consider a semi-infinite stack of two-dimensional square lattices, including a Hubbard interaction on the surface layer and an alternating...

💬 0 commentsarXiv:2601.11055v2PDF
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Posted in astro-ph.GA · 2026-01-16 · Zhejian Zhang, Nan Li, Shude Mao, Hu Zou, Zizhao He, Mingxiang Fu, Shenzhe Cui

Searching for Galaxy Cluster-Scale Strong lenses from the DESI Legacy Imaging Surveys

Galaxy cluster-scale strong gravitational lensing systems are rare yet valuable tools for investigating the properties of dark matter and dark energy, as well as providing the opportunity to study the distant universe at flux levels and spatial resolutions that would otherwise be unavailable. Large-scale imaging surveys present...

💬 0 commentsarXiv:2601.11054v1PDF
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Posted in physics.app-ph · 2026-01-16 · Qipan Wang, Tianxiang Zhu, Yibo Lin, Runsheng Wang, Ru Huang

ATSim3.5D: A Multiscale Thermal Simulator for 3.5D-IC Systems based on Nonlinear Multigrid Method

To resolve the rising temperatures in 3.5D-ICs, a thermal-aware design flow becomes increasingly crucial, necessitating an accurate and efficient thermal simulation tool. However, previous tools struggle to handle the unique heterogeneous multiscale structures in 3.5D-ICs and the nonlinear thermal effects caused by high temperatures....

💬 0 commentsarXiv:2601.11053v1PDF
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Posted in math.NA · 2026-01-16 · Muhammad Ammad, Md Yushalify Misro, Samia Bibi, Ahmad Ramli

Dirichlet Extremals for Discrete Plateau Problems in GT-Bezier Spaces via PSO

We study a discrete analogue of the parametric Plateau problem in a non-polynomial tensor-product surface spaces generated by the generalized trigonometric (GT)--Bézier basis. Boundary interpolation is imposed by prescribing the boundary rows and columns of the control net, while the interior control points are selected by a Dirichlet...

💬 0 commentsarXiv:2601.11677v1PDF
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Posted in cs.DC · 2026-01-16 · Peirong Zheng, Wenchao Xu, Haozhao Wang, Jinyu Chen, Xuemin Shen

HALO: Semantic-Aware Distributed LLM Inference in Lossy Edge Network

The deployment of large language models' (LLMs) inference at the edge can facilitate prompt service responsiveness while protecting user privacy. However, it is critically challenged by the resource constraints of a single edge node. Distributed inference has emerged to aggregate and leverage computational resources across multiple...

💬 0 commentsarXiv:2601.11676v1PDF
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Posted in cs.AI · 2026-01-16 · Michele Loi

Epistemic Constitutionalism Or: how to avoid coherence bias

Large language models increasingly function as artificial reasoners: they evaluate arguments, assign credibility, and express confidence. Yet their belief-forming behavior is governed by implicit, uninspected epistemic policies. This paper argues for an epistemic constitution for AI: explicit, contestable meta-norms that regulate how...

💬 0 commentsarXiv:2601.14295v4PDF
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Posted in math.NA · 2026-01-16 · Muhammad Ammad, Leevan Ling

An Adaptive Lagrangian B-Spline Framework for Point Cloud Manifold Evolution

We extend our recent curve-evolution framework based on localized B-spline interpolation to present an adaptive Lagrangian framework for the geometric evolution of point-cloud data representing smooth, codimension-one surfaces in $\mathbb{R}^3$. The method constructs overlapping, localized tensor-product B-spline patches, enabling...

💬 0 commentsarXiv:2601.11051v1PDF